STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_33860Hypothetical protein; Nsp33860; ORF_ID:nsp33860. (200 aa)    
Predicted Functional Partners:
NSP_50340
WD40 repeat protein; Nsp50340; ORF_ID:nsp50340.
  
     0.683
NSP_1860
Membrane GTPase LepA; Nsp1860; ORF_ID:nsp1860.
  
     0.596
NSP_31410
Hypothetical protein; Nsp31410; ORF_ID:nsp31410.
  
     0.579
NSP_46150
Hypothetical protein; Nsp46150; ORF_ID:nsp46150.
  
     0.578
NSP_42780
Hypothetical protein; Nsp42780; ORF_ID:nsp42780.
  
     0.574
NSP_44850
Hypothetical protein; Nsp44850; ORF_ID:nsp44850.
  
     0.564
NSP_40920
Hypothetical protein; Nsp40920; ORF_ID:nsp40920.
  
     0.562
NSP_29670
Hypothetical protein; Nsp29670; ORF_ID:nsp29670.
  
     0.561
NSP_3620
Hypothetical protein; Nsp3620; ORF_ID:nsp3620.
  
     0.559
NSP_14080
Protein of unknown function DUF820; Nsp14080; ORF_ID:nsp14080.
  
     0.558
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.