STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_33950CRISPR-associated RAMP, TM1809 family; Nsp33950; ORF_ID:nsp33950. (285 aa)    
Predicted Functional Partners:
NSP_34000
CRISPR-associated RAMP Cmr2; Nsp34000; ORF_ID:nsp34000.
 
 
 0.954
NSP_33820
Hypothetical protein; Nsp33820; ORF_ID:nsp33820.
 
 
 0.942
NSP_33830
Hypothetical protein; Nsp33830; ORF_ID:nsp33830.
  
 
 0.920
NSP_33910
Hypothetical protein; Nsp33910; ORF_ID:nsp33910.
 
     0.900
NSP_33940
Hypothetical protein; Nsp33940; ORF_ID:nsp33940.
 
     0.808
NSP_33980
CRISPR-associated RAMP, Csx10 family; Nsp33980; ORF_ID:nsp33980.
 
     0.793
NSP_33810
Hypothetical protein; Nsp33810; ORF_ID:nsp33810.
  
 
 0.791
NSP_33930
DUF324 domain-containing protein; Nsp33930; ORF_ID:nsp33930.
 
    
0.787
NSP_32800
CRISPR-associated protein Cas6; Nsp32800; ORF_ID:nsp32800.
 
   
 0.702
NSP_33920
Hypothetical protein; Nsp33920; ORF_ID:nsp33920.
       0.701
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.