STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_340CAB/ELIP/HLIP-like protein; Nsp340; ORF_ID:nsp340. (96 aa)    
Predicted Functional Partners:
NSP_350
Hypothetical protein; Nsp350; ORF_ID:nsp350.
       0.773
NSP_780
Hypothetical protein; Nsp780; ORF_ID:nsp780.
  
     0.771
NSP_47600
AbrB family transciptional regulator; Nsp47600; ORF_ID:nsp47600.
  
     0.764
NSP_39760
Cell division protein FtsI/penicillin-binding protein 2; Nsp39760; ORF_ID:nsp39760.
  
     0.758
NSP_4110
Transcriptional regulator AbrB; Nsp4110; ORF_ID:nsp4110.
  
     0.758
NSP_38940
Cyanobacterial hypothetical protein; Nsp38940; ORF_ID:nsp38940.
  
     0.754
NSP_28350
Hypothetical protein; Nsp28350; ORF_ID:nsp28350.
  
     0.753
NSP_40280
Low-affinity CO2 hydration protein CphX; Nsp40280; ORF_ID:nsp40280.
  
     0.752
NSP_33460
Hypothetical protein; Nsp33460; ORF_ID:nsp33460.
  
     0.749
NSP_15340
Cytochrome; Nsp15340; ORF_ID:nsp15340.
  
     0.748
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.