STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_34330Hypothetical protein; Nsp34330; ORF_ID:nsp34330. (92 aa)    
Predicted Functional Partners:
NSP_22000
Nitrogen regulatory protein P-II; Nsp22000; ORF_ID:nsp22000; Belongs to the P(II) protein family.
    
 
 0.956
NSP_2630
Global nitrogen regulatory protein, CRP family of transcriptional regulators; Nsp2630; ORF_ID:nsp2630.
  
 
 
 0.952
NSP_44660
WD-40 repeat protein; Nsp44660; ORF_ID:nsp44660.
    
  0.941
NSP_17890
DNA-directed RNA polymerase omega subunit; Nsp17890; ORF_ID:nsp17890.
  
 
  0.889
NSP_52640
Signal transduction histidine kinase; Nsp52640; ORF_ID:nsp52640.
   
 0.845
NSP_11010
Nsp11010; ORF_ID:nsp11010.
  
 
 
 0.839
NSP_3970
Chaperone protein HtpG; Nsp3970; ORF_ID:nsp3970.
   
  0.836
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.834
NSP_21180
Nsp21180; ORF_ID:nsp21180.
  
 
 
 0.832
NSP_14990
WD-40 repeat protein; Nsp14990; ORF_ID:nsp14990.
    
  0.827
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.