STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_34880Hypothetical protein; Nsp34880; ORF_ID:nsp34880. (97 aa)    
Predicted Functional Partners:
NSP_34870
Hypothetical protein; Nsp34870; ORF_ID:nsp34870.
 
   
 0.961
NSP_26460
Hypothetical protein; Nsp26460; ORF_ID:nsp26460.
  
     0.565
NSP_47190
Hypothetical protein; Nsp47190; ORF_ID:nsp47190.
  
     0.535
NSP_32120
Hypothetical protein; Nsp32120; ORF_ID:nsp32120.
  
     0.534
NSP_22770
DNA primase; Nsp22770; ORF_ID:nsp22770.
  
     0.496
NSP_6470
Hypothetical protein; Nsp6470; ORF_ID:nsp6470.
  
     0.476
NSP_21080
Hypothetical protein; Nsp21080; ORF_ID:nsp21080.
  
     0.475
NSP_22170
Putative cytoplasmic protein; Nsp22170; ORF_ID:nsp22170.
  
     0.449
NSP_44850
Hypothetical protein; Nsp44850; ORF_ID:nsp44850.
  
     0.440
NSP_15610
Putative cytoplasmic protein; Nsp15610; ORF_ID:nsp15610.
  
     0.439
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.