STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_35920Superfamily I DNA and RNA helicases and helicase subunits-like protein; Nsp35920; ORF_ID:nsp35920. (1408 aa)    
Predicted Functional Partners:
NSP_50800
Fibronectin/fibrinogen-binding protein; Nsp50800; ORF_ID:nsp50800.
  
    0.841
NSP_16750
Hypothetical protein; Nsp16750; ORF_ID:nsp16750.
  
    0.815
NSP_8850
Hypothetical protein; Nsp8850; ORF_ID:nsp8850.
  
    0.815
NSP_35910
Hypothetical protein; Nsp35910; ORF_ID:nsp35910.
       0.774
NSP_39810
Superfamily II DNA/RNA helicase, SNF2 family; Nsp39810; ORF_ID:nsp39810.
 
     0.760
NSP_40920
Hypothetical protein; Nsp40920; ORF_ID:nsp40920.
  
     0.735
NSP_11410
ATPase-like protein; Nsp11410; ORF_ID:nsp11410.
  
    0.716
NSP_40450
Abortive infection protein, putative; Nsp40450; ORF_ID:nsp40450.
   
    0.678
NSP_11000
Cyanobacterial hypothetical protein; Nsp11000; ORF_ID:nsp11000.
  
    0.620
NSP_21440
Hypothetical protein; Nsp21440; ORF_ID:nsp21440; Belongs to the peptidase S1B family.
  
     0.526
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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