STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_3724023S rRNA protein; Nsp37240; ORF_ID:nsp37240. (128 aa)    
Predicted Functional Partners:
NSP_43140
S23 ribosomal protein; Nsp43140; ORF_ID:nsp43140.
  
     0.753
NSP_37250
Hypothetical protein; Nsp37250; ORF_ID:nsp37250.
       0.572
NSP_2890
Hypothetical protein; Nsp2890; ORF_ID:nsp2890.
  
     0.524
NSP_27840
Hypothetical protein; Nsp27840; ORF_ID:nsp27840.
  
     0.508
NSP_6870
Hypothetical protein; Nsp6870; ORF_ID:nsp6870.
  
     0.450
NSP_37260
ABC transporter, transmembrane region:ABC transporter; Nsp37260; ORF_ID:nsp37260.
       0.434
NSP_52880
Hypothetical protein; Nsp52880; ORF_ID:nsp52880.
  
     0.413
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.