STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_37620Hypothetical protein; Nsp37620; ORF_ID:nsp37620. (297 aa)    
Predicted Functional Partners:
psbD
Photosystem II protein D2 (PsbD); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.
   
 
 0.847
NSP_52940
Photosystem II protein D2 (PsbD); Nsp52940; ORF_ID:nsp52940.
   
 
 0.847
psbA
Photosystem II protein D1 (PsbA); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
   
   0.816
NSP_33570
Photosystem II protein D1 (PsbA); Nsp33570; ORF_ID:nsp33570.
   
   0.816
NSP_35290
Photosystem II protein D1 (PsbA); Nsp35290; ORF_ID:nsp35290.
   
   0.816
NSP_5370
Photosystem II protein D1 (PsbA); Nsp5370; ORF_ID:nsp5370.
   
   0.816
NSP_37630
Hypothetical protein; Nsp37630; ORF_ID:nsp37630.
       0.773
NSP_37610
Hypothetical protein; Nsp37610; ORF_ID:nsp37610.
    
 
0.602
NSP_37590
Hypothetical protein; Nsp37590; ORF_ID:nsp37590.
    
 
0.520
NSP_43180
Substrate-binding region of ABC-type glycine betaine transport system; Nsp43180; ORF_ID:nsp43180.
  
    0.474
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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