STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_38340Hypothetical protein; Nsp38340; ORF_ID:nsp38340. (135 aa)    
Predicted Functional Partners:
NSP_40360
Carboxysome protein CcmN; Nsp40360; ORF_ID:nsp40360.
  
     0.725
NSP_32140
Hypothetical protein; Nsp32140; ORF_ID:nsp32140.
  
     0.713
NSP_29500
Signal transduction histidine kinase; Nsp29500; ORF_ID:nsp29500.
  
     0.697
NSP_53460
Hypothetical protein; Nsp53460; ORF_ID:nsp53460.
  
     0.684
NSP_38290
Hypothetical protein; Nsp38290; ORF_ID:nsp38290.
  
     0.683
NSP_53210
Cell division protein Ftn6; Nsp53210; ORF_ID:nsp53210.
  
     0.681
NSP_5780
Cell division protein ZipN/Ftn2/Arc6, specific for cyanobacteria and chloroplast; Nsp5780; ORF_ID:nsp5780.
  
     0.673
NSP_50930
Extensin-like protein; Nsp50930; ORF_ID:nsp50930.
  
     0.672
NSP_49110
Hypothetical protein; Nsp49110; ORF_ID:nsp49110.
  
     0.671
NSP_20970
Hypothetical protein; Nsp20970; ORF_ID:nsp20970.
  
     0.669
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.