STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_38470Competence protein F-like, phosphoribosyltransferase domain; Nsp38470; ORF_ID:nsp38470. (227 aa)    
Predicted Functional Partners:
NSP_80
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake; Nsp80; ORF_ID:nsp80.
 
 
 0.937
NSP_14050
Competence protein; Nsp14050; ORF_ID:nsp14050.
 
  
 0.929
NSP_11210
DNA repair protein RadC; Nsp11210; ORF_ID:nsp11210; Belongs to the UPF0758 family.
 
    0.884
NSP_5270
MG(2+) chelatase family protein / ComM-like protein; Nsp5270; ORF_ID:nsp5270.
 
  
 0.853
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.824
NSP_25150
N-acetylglucosamine-6-phosphate deacetylase; Nsp25150; ORF_ID:nsp25150.
  
    0.802
NSP_38740
Arogenate dehydrogenase; Nsp38740; ORF_ID:nsp38740.
   
  
 0.728
NSP_52460
Cyclohexadienyl dehydrogenase; Nsp52460; ORF_ID:nsp52460.
   
  
 0.728
NSP_5070
Hypothetical protein; Nsp5070; ORF_ID:nsp5070.
  
 
 0.649
NSP_52640
Signal transduction histidine kinase; Nsp52640; ORF_ID:nsp52640.
  
  
 0.633
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.