STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_38780Hypothetical protein DUF 1768; Nsp38780; ORF_ID:nsp38780. (161 aa)    
Predicted Functional Partners:
NSP_39830
Nsp39830; ORF_ID:nsp39830.
 
   
 0.982
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
 
   
 0.906
NSP_15490
Cell division control protein CDC48-like protein; Nsp15490; ORF_ID:nsp15490; Belongs to the AAA ATPase family.
    
 
 0.797
NSP_28600
AAA ATPase, central region; Nsp28600; ORF_ID:nsp28600.
    
 
 0.797
NSP_29710
ATPase, AAA family protein; Nsp29710; ORF_ID:nsp29710.
    
 
 0.797
NSP_30190
AAA family ATPase; Nsp30190; ORF_ID:nsp30190.
    
 
 0.797
NSP_30200
Hypothetical protein; Nsp30200; ORF_ID:nsp30200.
    
 
 0.797
NSP_30930
ATPase of the AAA+ family protein; Nsp30930; ORF_ID:nsp30930.
    
 
 0.797
NSP_44100
Hypothetical protein; Nsp44100; ORF_ID:nsp44100.
    
 
 0.797
NSP_40880
Protein hesA, heterocyst; Nsp40880; ORF_ID:nsp40880.
    
 0.738
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.