STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_390Cytochrome d ubiquinol oxidase subunit I; Nsp390; ORF_ID:nsp390; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. (469 aa)    
Predicted Functional Partners:
NSP_410
Cytochrome d ubiquinol oxidase subunit II; Nsp410; ORF_ID:nsp410.
 0.999
NSP_4130
Succinate dehydrogenase iron-sulfur protein; Nsp4130; ORF_ID:nsp4130; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
 0.620
ndhA
NAD(P)H-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
     
 0.618
ndhE
NADH dehydrogenase subunit 4L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
     
 0.608
NSP_39500
NAD(P)H-quinone oxidoreductase chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 6 family.
     
 0.601
NSP_15210
Succinate dehydrogenase flavoprotein subunit; Nsp15210; ORF_ID:nsp15210.
     
 0.571
NSP_28630
NADH dehydrogenase subunit 4, Involved in CO2 fixation; Nsp28630; ORF_ID:nsp28630.
     
 0.538
NSP_40290
NADH dehydrogenase subunit 4, Involved in CO2 fixation; Nsp40290; ORF_ID:nsp40290.
     
 0.538
NSP_380
SMC domain protein; Nsp380; ORF_ID:nsp380.
 
     0.534
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
  
 0.516
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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