STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_39070Kynurenine formamidase, bacterial; Nsp39070; ORF_ID:nsp39070. (238 aa)    
Predicted Functional Partners:
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.840
NSP_36770
Acetamidase; Nsp36770; ORF_ID:nsp36770.
  
  
  0.635
NSP_6200
Hypothetical protein; Nsp6200; ORF_ID:nsp6200.
    
  0.583
NSP_51400
Hypothetical protein; Nsp51400; ORF_ID:nsp51400.
    
  0.567
nadE
NAD synthetase/ Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.549
NSP_28280
FMN reductase; Nsp28280; ORF_ID:nsp28280.
    
  0.530
NSP_33550
Arsenic resistance protein ArsH; Nsp33550; ORF_ID:nsp33550.
    
  0.530
NSP_5490
HlyD family secretion protein; Nsp5490; ORF_ID:nsp5490.
    
  0.503
NSP_35080
Glyoxylate reductase / Hydroxypyruvate reductase; Nsp35080; ORF_ID:nsp35080; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.498
NSP_41690
D-lactate dehydrogenase; Nsp41690; ORF_ID:nsp41690; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.498
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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