STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_39710Uncharacterized protein conserved in cyanobacteria; Nsp39710; ORF_ID:nsp39710. (179 aa)    
Predicted Functional Partners:
NSP_3650
Hypothetical protein; Nsp3650; ORF_ID:nsp3650.
  
     0.591
NSP_29670
Hypothetical protein; Nsp29670; ORF_ID:nsp29670.
  
   
 0.571
NSP_39700
Hypothetical protein; Nsp39700; ORF_ID:nsp39700.
       0.557
NSP_40430
Protein of unknown function DUF820; Nsp40430; ORF_ID:nsp40430.
  
     0.497
NSP_49050
Putative dioxygenase; Nsp49050; ORF_ID:nsp49050.
  
     0.495
NSP_1590
Putative dioxygenase; Nsp1590; ORF_ID:nsp1590.
  
     0.493
NSP_25590
Hypothetical protein; Nsp25590; ORF_ID:nsp25590.
  
     0.479
NSP_48440
Protein of unknown function DUF820; Nsp48440; ORF_ID:nsp48440.
  
     0.469
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.465
NSP_14330
Cell division protein FtsQ; Nsp14330; ORF_ID:nsp14330.
  
     0.459
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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