STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_40520NifT protein; Nsp40520; ORF_ID:nsp40520. (67 aa)    
Predicted Functional Partners:
NSP_40530
NifZ protein; Nsp40530; ORF_ID:nsp40530.
 
  
 0.961
nifW
Nitrogenase stabilizing/protective protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.872
NSP_40650
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB; Nsp40650; ORF_ID:nsp40650.
 
  
 0.863
NSP_40840
Nitrogenase FeMo-cofactor carrier protein NifX; Nsp40840; ORF_ID:nsp40840.
 
  
 0.840
NSP_40540
Homocitrate synthase; Nsp40540; ORF_ID:nsp40540; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.838
NSP_40850
NifX-associated protein; Nsp40850; ORF_ID:nsp40850.
 
    0.835
NSP_40830
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN; Nsp40830; ORF_ID:nsp40830; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.798
NSP_40860
Hypothetical protein; Nsp40860; ORF_ID:nsp40860.
 
    0.782
NSP_41430
4Fe-4S ferredoxin, nitrogenase-associated; Nsp41430; ORF_ID:nsp41430.
  
   
 0.758
NSP_41360
Nitrogenase-associated protein NifO; Nsp41360; ORF_ID:nsp41360; Belongs to the ArsC family.
  
     0.757
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.