STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_40930Hypothetical protein; Nsp40930; ORF_ID:nsp40930. (142 aa)    
Predicted Functional Partners:
NSP_40920
Hypothetical protein; Nsp40920; ORF_ID:nsp40920.
 
     0.527
NSP_32530
Hypothetical protein; Nsp32530; ORF_ID:nsp32530.
  
     0.512
NSP_53500
Amino acid transporter; Nsp53500; ORF_ID:nsp53500.
  
     0.485
NSP_28530
Methyl-accepting chemotaxis protein; Nsp28530; ORF_ID:nsp28530.
  
     0.439
NSP_32980
Hypothetical protein; Nsp32980; ORF_ID:nsp32980.
  
     0.431
NSP_25730
Permease; Nsp25730; ORF_ID:nsp25730.
  
     0.416
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.