STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_4100Abortive infection protein; Nsp4100; ORF_ID:nsp4100. (257 aa)    
Predicted Functional Partners:
NSP_31180
Hypothetical protein; Nsp31180; ORF_ID:nsp31180.
  
     0.668
NSP_50630
Hypothetical protein; Nsp50630; ORF_ID:nsp50630.
 
     0.663
NSP_2570
Gamma-glutamyltransferase; Nsp2570; ORF_ID:nsp2570.
  
     0.656
NSP_44600
Hypothetical protein; Nsp44600; ORF_ID:nsp44600.
  
     0.647
NSP_4110
Transcriptional regulator AbrB; Nsp4110; ORF_ID:nsp4110.
 
   
 0.642
NSP_6380
Hypothetical protein; Nsp6380; ORF_ID:nsp6380.
  
     0.625
NSP_9850
Hypothetical protein; Nsp9850; ORF_ID:nsp9850.
  
     0.605
NSP_38510
Hypothetical protein; Nsp38510; ORF_ID:nsp38510.
  
     0.592
NSP_39770
Methyl-accepting chemotaxis protein; Nsp39770; ORF_ID:nsp39770.
  
     0.581
NSP_27930
Type II secretory pathway, pseudopilin PulG; Nsp27930; ORF_ID:nsp27930.
  
     0.575
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.