STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_42870Hypothetical protein; Nsp42870; ORF_ID:nsp42870. (367 aa)    
Predicted Functional Partners:
NSP_42880
Hypothetical protein; Nsp42880; ORF_ID:nsp42880.
       0.788
NSP_42860
Hypothetical protein; Nsp42860; ORF_ID:nsp42860.
       0.634
pheS
Phenylalanyl-tRNA synthetase alpha chain; Nsp42850; ORF_ID:nsp42850; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.447
NSP_52570
Thiamine pyrophosphate-requiring enzymes; Nsp52570; ORF_ID:nsp52570; Belongs to the TPP enzyme family.
  
     0.414
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.