STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_42980Sugar ABC transporter, permease protein; Nsp42980; ORF_ID:nsp42980. (307 aa)    
Predicted Functional Partners:
NSP_15010
Sugar ABC transporter, ATP-binding protein; Nsp15010; ORF_ID:nsp15010; Belongs to the ABC transporter superfamily.
 
 0.995
NSP_7940
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; Nsp7940; ORF_ID:nsp7940; Belongs to the ABC transporter superfamily.
 
 0.995
NSP_29560
ABC transporter sugar permease; Nsp29560; ORF_ID:nsp29560.
 0.994
NSP_5090
Maltose/maltodextrin ABC transporter, permease protein MalG; Nsp5090; ORF_ID:nsp5090.
 
 0.992
NSP_7240
ABC transporter sugar permease; Nsp7240; ORF_ID:nsp7240.
 0.991
NSP_19770
Sugar ABC transporter, periplasmic sugar-binding protein; Nsp19770; ORF_ID:nsp19770.
 0.989
NSP_11590
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein; Nsp11590; ORF_ID:nsp11590.
 0.985
NSP_5690
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein; Nsp5690; ORF_ID:nsp5690.
 0.984
NSP_42990
Nuclease subunit of the excinuclease complex; Nsp42990; ORF_ID:nsp42990.
       0.564
NSP_19130
Iron(III)-transport ATP-binding protein; Nsp19130; ORF_ID:nsp19130; Belongs to the ABC transporter superfamily.
 
  
 0.546
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.