STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_43090Branched-chain amino acid transport ATP-binding protein LivF; Nsp43090; ORF_ID:nsp43090. (247 aa)    
Predicted Functional Partners:
NSP_18250
Branched-chain amino acid transport system permease protein LivM; Nsp18250; ORF_ID:nsp18250; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
NSP_18240
Branched-chain amino acid transport ATP-binding protein LivG; Nsp18240; ORF_ID:nsp18240.
 
 
0.965
NSP_45570
High-affinity branched-chain amino acid transport system permease protein LivH; Nsp45570; ORF_ID:nsp45570; Belongs to the binding-protein-dependent transport system permease family.
 
 0.963
NSP_24460
Branched-chain amino acid ABC transporter, amino acid-binding protein; Nsp24460; ORF_ID:nsp24460.
 
 
 0.952
NSP_11020
Hypothetical protein; Nsp11020; ORF_ID:nsp11020.
 
 
 0.892
NSP_11780
ABC transporter; Nsp11780; ORF_ID:nsp11780.
 
     
0.886
NSP_43100
Hypothetical protein; Nsp43100; ORF_ID:nsp43100.
       0.773
NSP_48810
ABC transporter ATP-binding protein YvcR; Nsp48810; ORF_ID:nsp48810.
 
    
0.687
NSP_17530
Coenzyme F390 synthetase; Nsp17530; ORF_ID:nsp17530.
  
 
  0.661
NSP_45130
Protein kinase; Nsp45130; ORF_ID:nsp45130.
  
 
 0.656
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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