STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_43170Hypothetical protein; Nsp43170; ORF_ID:nsp43170. (210 aa)    
Predicted Functional Partners:
NSP_43180
Substrate-binding region of ABC-type glycine betaine transport system; Nsp43180; ORF_ID:nsp43180.
 
 0.999
NSP_43160
Glycine betaine transport ATP-binding protein; Nsp43160; ORF_ID:nsp43160.
 0.998
NSP_6940
L-proline glycine betaine ABC transport system permease protein ProV; Nsp6940; ORF_ID:nsp6940.
 
  
  0.831
NSP_43150
Alpha/beta hydrolase fold; Nsp43150; ORF_ID:nsp43150.
       0.564
NSP_19130
Iron(III)-transport ATP-binding protein; Nsp19130; ORF_ID:nsp19130; Belongs to the ABC transporter superfamily.
   
  0.457
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
   
  0.437
NSP_46960
Zn-dependent protease; Nsp46960; ORF_ID:nsp46960; Belongs to the peptidase M50B family.
    
  0.427
NSP_9890
Inosine-5'-monophosphate dehydrogenase; Nsp9890; ORF_ID:nsp9890.
    
  0.404
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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