Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSP_43500Putative transcriptional regulators; Nsp43500; ORF_ID:nsp43500. (120 aa)    
Predicted Functional Partners:
NSP_3620
Hypothetical protein; Nsp3620; ORF_ID:nsp3620.
   
 0.871
NSP_36240
Hypothetical protein; Nsp36240; ORF_ID:nsp36240.
   
 0.871
NSP_42780
Hypothetical protein; Nsp42780; ORF_ID:nsp42780.
   
 0.871
NSP_46150
Hypothetical protein; Nsp46150; ORF_ID:nsp46150.
   
 0.871
NSP_6620
Cytotoxic translational repressor of toxin-antitoxin stability system; Nsp6620; ORF_ID:nsp6620.
   
 0.871
NSP_3860
Hypothetical protein; Nsp3860; ORF_ID:nsp3860.
   
  0.812
NSP_32250
Hypothetical protein; Nsp32250; ORF_ID:nsp32250.
     
 0.776
NSP_32220
HigB toxin protein; Nsp32220; ORF_ID:nsp32220.
     
 0.768
NSP_12200
Transcriptional Regulator of molybdate metabolism, XRE family; Nsp12200; ORF_ID:nsp12200.
     
 0.766
NSP_49900
Regulators of stationary/sporulation gene expression; Nsp49900; ORF_ID:nsp49900.
     
 0.753
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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