STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_43960DNA-cytosine methyltransferase; Nsp43960; ORF_ID:nsp43960. (432 aa)    
Predicted Functional Partners:
NSP_43970
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.565
NSP_32370
DNA-cytosine methyltransferase; Nsp32370; ORF_ID:nsp32370; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
  
 
0.539
NSP_43950
Hypothetical protein; Nsp43950; ORF_ID:nsp43950.
       0.484
NSP_34170
Modification methylase HgiCII; Nsp34170; ORF_ID:nsp34170.
 
  
 
0.447
NSP_51370
Modification methylase DsaV; Nsp51370; ORF_ID:nsp51370.
  
  
 
0.442
NSP_43980
Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.438
NSP_11630
DNA (cytosine-5-)-methyltransferase; Nsp11630; ORF_ID:nsp11630.
  
  
 
0.436
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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