STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_44400Putative stomatin/prohibitin-family membrane protease subunit YbbK; Nsp44400; ORF_ID:nsp44400. (331 aa)    
Predicted Functional Partners:
ftsH-3
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.884
ftsH-2
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.882
NSP_30700
Cell division protein FtsH; Nsp30700; ORF_ID:nsp30700.
   
 0.879
NSP_30710
Cell division protein FtsH; Nsp30710; ORF_ID:nsp30710; Belongs to the AAA ATPase family.
   
 0.879
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.876
NSP_34790
ATP-dependent Zn protease; Nsp34790; ORF_ID:nsp34790.
   
  0.876
NSP_37720
Hypothetical protein; Nsp37720; ORF_ID:nsp37720.
   
  0.876
NSP_44410
Putative activity regulator of membrane protease YbbK; Nsp44410; ORF_ID:nsp44410.
 
  
 0.785
NSP_45940
Putative membrane protein; Nsp45940; ORF_ID:nsp45940.
   
 0.739
NSP_47420
Rhomboid-like protein; Nsp47420; ORF_ID:nsp47420.
   
 0.739
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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