STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_44410Putative activity regulator of membrane protease YbbK; Nsp44410; ORF_ID:nsp44410. (126 aa)    
Predicted Functional Partners:
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.851
NSP_44400
Putative stomatin/prohibitin-family membrane protease subunit YbbK; Nsp44400; ORF_ID:nsp44400.
 
  
 0.785
NSP_44920
Hypothetical protein; Nsp44920; ORF_ID:nsp44920.
  
     0.755
NSP_48020
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase; Nsp48020; ORF_ID:nsp48020.
  
    0.721
NSP_12330
Hypothetical protein; Nsp12330; ORF_ID:nsp12330.
  
     0.719
NSP_46790
Serine/threonine kinase; Nsp46790; ORF_ID:nsp46790.
  
     0.700
NSP_16000
Hypothetical protein; Nsp16000; ORF_ID:nsp16000.
  
     0.685
NSP_4950
Hypothetical protein; Nsp4950; ORF_ID:nsp4950.
  
     0.677
NSP_17900
Hypothetical protein; Nsp17900; ORF_ID:nsp17900.
  
     0.670
NSP_21980
Hypothetical protein; Nsp21980; ORF_ID:nsp21980.
  
     0.666
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.