STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_44920Hypothetical protein; Nsp44920; ORF_ID:nsp44920. (148 aa)    
Predicted Functional Partners:
NSP_16000
Hypothetical protein; Nsp16000; ORF_ID:nsp16000.
  
     0.767
NSP_12330
Hypothetical protein; Nsp12330; ORF_ID:nsp12330.
  
     0.755
NSP_44410
Putative activity regulator of membrane protease YbbK; Nsp44410; ORF_ID:nsp44410.
  
     0.755
NSP_39240
Hypothetical protein; Nsp39240; ORF_ID:nsp39240.
  
     0.751
NSP_21980
Hypothetical protein; Nsp21980; ORF_ID:nsp21980.
  
     0.722
NSP_4950
Hypothetical protein; Nsp4950; ORF_ID:nsp4950.
  
     0.717
NSP_46790
Serine/threonine kinase; Nsp46790; ORF_ID:nsp46790.
  
     0.708
NSP_50310
Transcriptional regulator, Crp/Fnr family; Nsp50310; ORF_ID:nsp50310.
  
     0.699
NSP_49760
Hypothetical protein; Nsp49760; ORF_ID:nsp49760.
  
     0.693
NSP_45050
Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...]
  
     0.690
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.