STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_450204-amino-4-deoxy-L-arabinose transferase and glycosyltransferases of PMT family; Nsp45020; ORF_ID:nsp45020. (609 aa)    
Predicted Functional Partners:
NSP_14640
Dolichol-phosphate mannosyltransferase; Nsp14640; ORF_ID:nsp14640.
 
 
  0.770
NSP_43970
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.563
NSP_45010
Hypothetical protein; Nsp45010; ORF_ID:nsp45010.
       0.559
NSP_28100
Hypothetical protein; Nsp28100; ORF_ID:nsp28100.
  
     0.546
NSP_16480
Hypothetical protein; Nsp16480; ORF_ID:nsp16480.
  
    0.510
NSP_38510
Hypothetical protein; Nsp38510; ORF_ID:nsp38510.
  
     0.502
NSP_10780
Hypothetical protein; Nsp10780; ORF_ID:nsp10780.
  
     0.491
NSP_43980
Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.469
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
   
 0.455
NSP_48850
Outer membrane protein; Nsp48850; ORF_ID:nsp48850.
  
     0.415
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.