STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menGUbiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol. (229 aa)    
Predicted Functional Partners:
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
    
 0.836
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
    
 0.791
NSP_42130
Hypothetical protein; Nsp42130; ORF_ID:nsp42130; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.751
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
    
 0.720
NSP_300
3-polyprenyl-4-hydroxybenzoate carboxy-lyase; Nsp300; ORF_ID:nsp300; Belongs to the UbiD family.
 
 
    0.715
NSP_26950
Long-chain-fatty-acid--CoA ligase; Nsp26950; ORF_ID:nsp26950.
     
 0.665
NSP_26940
Malonyl CoA-acyl carrier protein transacylase; Nsp26940; ORF_ID:nsp26940.
    
 0.662
NSP_42160
Malonyl CoA-acyl carrier protein transacylase; Nsp42160; ORF_ID:nsp42160.
    
 0.662
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.651
NSP_45700
Hypothetical protein; Nsp45700; ORF_ID:nsp45700; Belongs to the UPF0754 family.
       0.603
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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