Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSP_4580Hypothetical protein; Nsp4580; ORF_ID:nsp4580. (153 aa)    
Predicted Functional Partners:
NSP_1360
Hypothetical protein; Nsp1360; ORF_ID:nsp1360; Belongs to the UPF0337 (CsbD) family.
  
    0.786
NSP_4590
Signal Transduction Histidine Kinase (STHK), LytS; Nsp4590; ORF_ID:nsp4590.
  
  
 0.655
NSP_5940
5-nucleotidase SurE; Nsp5940; ORF_ID:nsp5940.
 
      0.554
NSP_6590
Hypothetical protein; Nsp6590; ORF_ID:nsp6590.
      
 0.535
NSP_4600
Hypothetical protein; Nsp4600; ORF_ID:nsp4600.
       0.520
NSP_4570
Hypothetical protein; Nsp4570; ORF_ID:nsp4570.
       0.448
NSP_19030
Hypothetical protein; Nsp19030; ORF_ID:nsp19030.
   
    0.403
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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