STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_46550Transcriptional regulator, TetR family; Nsp46550; ORF_ID:nsp46550. (190 aa)    
Predicted Functional Partners:
NSP_46560
Heterocyst specific ABC-transporter, membrane fusion protein DevB-like protein; Nsp46560; ORF_ID:nsp46560.
 
     0.628
NSP_46570
Putative alpha/beta hydrolase superfamily, slr1827-like protein; Nsp46570; ORF_ID:nsp46570.
       0.519
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.448
NSP_1710
Pyruvate kinase; Nsp1710; ORF_ID:nsp1710; Belongs to the pyruvate kinase family.
    
 0.446
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
   
 0.440
NSP_47070
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site; Nsp47070; ORF_ID:nsp47070.
   
 
 0.421
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
   
 0.415
NSP_13320
Cobalt-precorrin-8x methylmutase; Nsp13320; ORF_ID:nsp13320.
  
   
 0.413
NSP_15820
C3: similar to Vanillate O-demethylase oxygenase; Nsp15820; ORF_ID:nsp15820.
  
  
 0.404
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
     
 0.404
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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