STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_47140Chromosome (plasmid) partitioning protein ParB; Nsp47140; ORF_ID:nsp47140; Belongs to the ParB family. (538 aa)    
Predicted Functional Partners:
NSP_47120
Chromosome (plasmid) partitioning protein ParA; Nsp47120; ORF_ID:nsp47120.
 
 0.918
NSP_30260
Chromosome (plasmid) partitioning protein ParA; Nsp30260; ORF_ID:nsp30260.
 
 
 0.906
NSP_17110
ParA family protein; Nsp17110; ORF_ID:nsp17110.
 
 
 0.884
rsmG
rRNA small subunit methyltransferase, glucose inhibited division protein GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.754
NSP_4220
Hypothetical protein; Nsp4220; ORF_ID:nsp4220.
    
 
 0.720
NSP_8960
Hypothetical protein; Nsp8960; ORF_ID:nsp8960.
    
 
 0.720
NSP_50240
Cobyrinic acid a,c-diamide synthase; Nsp50240; ORF_ID:nsp50240.
  
 
 0.630
NSP_34990
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.482
NSP_35820
Homoserine dehydrogenase; Nsp35820; ORF_ID:nsp35820.
     
 0.473
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.464
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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