STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_47230Peptidyl-prolyl cis-trans isomerase; Nsp47230; ORF_ID:nsp47230. (352 aa)    
Predicted Functional Partners:
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
  
 
 0.987
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
 
 0.985
NSP_3970
Chaperone protein HtpG; Nsp3970; ORF_ID:nsp3970.
   
 0.980
NSP_31140
ATP-dependent RNA helicase RhlE; Nsp31140; ORF_ID:nsp31140; Belongs to the DEAD box helicase family.
 
 0.957
NSP_1950
Cold-shock DEAD-box protein A; Nsp1950; ORF_ID:nsp1950; Belongs to the DEAD box helicase family.
  
 0.951
NSP_44340
Superfamily II DNA and RNA helicase; Nsp44340; ORF_ID:nsp44340.
  
 0.951
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
  
 
 0.949
NSP_44660
WD-40 repeat protein; Nsp44660; ORF_ID:nsp44660.
   
 0.948
NSP_26950
Long-chain-fatty-acid--CoA ligase; Nsp26950; ORF_ID:nsp26950.
   
 
 0.935
NSP_26940
Malonyl CoA-acyl carrier protein transacylase; Nsp26940; ORF_ID:nsp26940.
   
 
 0.930
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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