STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_47610Rrf2 family transcriptional regulator; Nsp47610; ORF_ID:nsp47610. (147 aa)    
Predicted Functional Partners:
NSP_40690
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.903
NSP_37340
Cysteine desulfurase; Nsp37340; ORF_ID:nsp37340.
 
 0.882
NSP_40680
Cysteine desulfurase, NifS subfamily; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
 
 0.858
NSP_6340
Cysteine desulfurase; Nsp6340; ORF_ID:nsp6340; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.834
NSP_28130
Cysteine desulfurase; Nsp28130; ORF_ID:nsp28130.
 
 0.823
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.561
NSP_44610
Tellurite resistance protein; Nsp44610; ORF_ID:nsp44610.
  
  
 0.515
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
   
 
 0.506
NSP_43120
Sulfur carrier protein adenylyltransferase ThiF; Nsp43120; ORF_ID:nsp43120.
  
 
 0.459
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.433
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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