STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnjZn-dependent hydrolase, RNA-metabolising; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (605 aa)    
Predicted Functional Partners:
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
  
 0.872
NSP_39950
Solanesyl diphosphate synthase; Nsp39950; ORF_ID:nsp39950; Belongs to the FPP/GGPP synthase family.
  
    0.811
NSP_830
Nsp830; ORF_ID:nsp830; Belongs to the FPP/GGPP synthase family.
  
    0.811
NSP_31910
Cell division protein FtsI [Peptidoglycan synthetase]; Nsp31910; ORF_ID:nsp31910.
      0.629
NSP_13290
WD-40 repeat protein; Nsp13290; ORF_ID:nsp13290.
      
 0.613
hetR
Main regulator of heterocyst differentiation HetR; Controls heterocyst differentiation. Has both a protease and a DNA-binding activity; Belongs to the peptidase S48 family.
      
 0.613
mtnP
5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
      
 0.613
NSP_23610
Hypothetical protein; Nsp23610; ORF_ID:nsp23610.
      
 0.613
sat
Sulfate adenylyltransferase, dissimilatory-type; Nsp23620; ORF_ID:nsp23620; Belongs to the sulfate adenylyltransferase family.
      
 0.613
NSP_32600
Heterocyst specific ABC-transporter, membrane fusion protein DevB-like protein; Nsp32600; ORF_ID:nsp32600.
      
 0.613
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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