STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_4880Hypothetical protein; Nsp4880; ORF_ID:nsp4880. (355 aa)    
Predicted Functional Partners:
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.800
NSP_38470
Competence protein F-like, phosphoribosyltransferase domain; Nsp38470; ORF_ID:nsp38470.
   
    0.604
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.568
NSP_4850
Hypothetical protein; Nsp4850; ORF_ID:nsp4850.
       0.528
NSP_4860
Hypothetical protein; Nsp4860; ORF_ID:nsp4860.
       0.528
NSP_4870
Rieske (2Fe-2S) region protein; Nsp4870; ORF_ID:nsp4870.
       0.528
NSP_41780
Hypothetical protein; Nsp41780; ORF_ID:nsp41780; Belongs to the SOS response-associated peptidase family.
   
    0.453
NSP_38740
Arogenate dehydrogenase; Nsp38740; ORF_ID:nsp38740.
  
    0.423
NSP_52460
Cyclohexadienyl dehydrogenase; Nsp52460; ORF_ID:nsp52460.
  
    0.423
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.