Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSP_490Hypothetical protein; Nsp490; ORF_ID:nsp490. (60 aa)    
Predicted Functional Partners:
NSP_500
Hypothetical protein; Nsp500; ORF_ID:nsp500.
   
  0.919
NSP_40620
Hypothetical protein; Nsp40620; ORF_ID:nsp40620.
   
  0.676
NSP_10260
Hypothetical protein; Nsp10260; ORF_ID:nsp10260.
    
  0.624
NSP_17570
Hypothetical protein; Nsp17570; ORF_ID:nsp17570.
    
  0.624
NSP_17750
Protein of unknown function UPF0150; Nsp17750; ORF_ID:nsp17750.
    
  0.624
NSP_17810
Hypothetical protein; Nsp17810; ORF_ID:nsp17810.
    
  0.624
NSP_20490
Hypothetical protein; Nsp20490; ORF_ID:nsp20490.
    
  0.624
NSP_24070
Hypothetical protein; Nsp24070; ORF_ID:nsp24070.
    
  0.624
NSP_27920
Hypothetical protein; Nsp27920; ORF_ID:nsp27920.
    
  0.624
NSP_31060
Hypothetical protein; Nsp31060; ORF_ID:nsp31060.
    
  0.624
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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