Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
NSP_17970 | NSP_49730 | CsaB protein; Nsp17970; ORF_ID:nsp17970. | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | 0.532 |
NSP_22880 | NSP_35880 | Hypothetical protein; Nsp22880; ORF_ID:nsp22880. | Peptidase M23B precursor; Nsp35880; ORF_ID:nsp35880. | 0.688 |
NSP_22880 | NSP_49730 | Hypothetical protein; Nsp22880; ORF_ID:nsp22880. | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | 0.441 |
NSP_35880 | NSP_22880 | Peptidase M23B precursor; Nsp35880; ORF_ID:nsp35880. | Hypothetical protein; Nsp22880; ORF_ID:nsp22880. | 0.688 |
NSP_35880 | NSP_49730 | Peptidase M23B precursor; Nsp35880; ORF_ID:nsp35880. | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | 0.574 |
NSP_49720 | NSP_49730 | Tyrosine-protein kinase Wzc; Nsp49720; ORF_ID:nsp49720. | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | 0.421 |
NSP_49730 | NSP_17970 | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | CsaB protein; Nsp17970; ORF_ID:nsp17970. | 0.532 |
NSP_49730 | NSP_22880 | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | Hypothetical protein; Nsp22880; ORF_ID:nsp22880. | 0.441 |
NSP_49730 | NSP_35880 | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | Peptidase M23B precursor; Nsp35880; ORF_ID:nsp35880. | 0.574 |
NSP_49730 | NSP_49720 | Sporulation protein; Nsp49730; ORF_ID:nsp49730. | Tyrosine-protein kinase Wzc; Nsp49720; ORF_ID:nsp49720. | 0.421 |