STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_49910UDP-N-acetylglucosamine 4,6-dehydratase; Nsp49910; ORF_ID:nsp49910. (672 aa)    
Predicted Functional Partners:
NSP_6050
Pleiotropic regulatory protein; Nsp6050; ORF_ID:nsp6050; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.988
NSP_47370
Aminotransferase; Nsp47370; ORF_ID:nsp47370; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.981
NSP_23410
Hypothetical protein; Nsp23410; ORF_ID:nsp23410.
 
 
 0.966
NSP_30580
Tyrosine-protein kinase Wzc; Nsp30580; ORF_ID:nsp30580.
 
 
 0.965
NSP_37940
Tyrosine-protein kinase Wzc; Nsp37940; ORF_ID:nsp37940.
 
 
 0.965
NSP_49720
Tyrosine-protein kinase Wzc; Nsp49720; ORF_ID:nsp49720.
 
 
 0.965
NSP_23540
Hypothetical protein; Nsp23540; ORF_ID:nsp23540.
  
 
 0.957
NSP_47410
Hypothetical protein; Nsp47410; ORF_ID:nsp47410.
  
 
 0.957
NSP_34470
Hypothetical protein; Nsp34470; ORF_ID:nsp34470.
  
 
 0.886
NSP_47400
Capsule polysaccharide export protein; Nsp47400; ORF_ID:nsp47400.
  
 
 0.886
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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