Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSP_500Hypothetical protein; Nsp500; ORF_ID:nsp500. (72 aa)    
Predicted Functional Partners:
NSP_490
Hypothetical protein; Nsp490; ORF_ID:nsp490.
   
  0.919
NSP_45270
Hypothetical protein; Nsp45270; ORF_ID:nsp45270.
  
  
  0.736
NSP_27910
Hypothetical protein; Nsp27910; ORF_ID:nsp27910.
  
 
  0.690
NSP_10250
Hypothetical protein; Nsp10250; ORF_ID:nsp10250.
  
 
  0.669
NSP_32220
HigB toxin protein; Nsp32220; ORF_ID:nsp32220.
  
  
  0.656
NSP_51810
Hypothetical protein; Nsp51810; ORF_ID:nsp51810.
  
     0.632
NSP_16570
Hypothetical protein; Nsp16570; ORF_ID:nsp16570.
    
  0.624
NSP_17560
Hypothetical protein; Nsp17560; ORF_ID:nsp17560.
    
  0.624
NSP_17800
Hypothetical protein; Nsp17800; ORF_ID:nsp17800.
    
  0.624
NSP_34510
Hypothetical protein; Nsp34510; ORF_ID:nsp34510.
    
  0.624
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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