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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_500Hypothetical protein; Nsp500; ORF_ID:nsp500. (72 aa)    
Predicted Functional Partners:
NSP_490
Hypothetical protein; Nsp490; ORF_ID:nsp490.
   
   0.876
NSP_51810
Hypothetical protein; Nsp51810; ORF_ID:nsp51810.
  
     0.632
NSP_12680
Hypothetical protein; Nsp12680; ORF_ID:nsp12680.
  
     0.547
NSP_40180
Hypothetical protein; Nsp40180; ORF_ID:nsp40180.
  
     0.541
NSP_27910
Hypothetical protein; Nsp27910; ORF_ID:nsp27910.
  
 
   0.531
NSP_14080
Protein of unknown function DUF820; Nsp14080; ORF_ID:nsp14080.
  
     0.522
NSP_10250
Hypothetical protein; Nsp10250; ORF_ID:nsp10250.
  
 
   0.500
NSP_15610
Putative cytoplasmic protein; Nsp15610; ORF_ID:nsp15610.
  
     0.486
NSP_52020
Hypothetical protein; Nsp52020; ORF_ID:nsp52020.
  
     0.485
NSP_46500
Phage integrase; Nsp46500; ORF_ID:nsp46500; Belongs to the 'phage' integrase family.
  
     0.479
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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