STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_50180Glycosyl transferase, group 1; Nsp50180; ORF_ID:nsp50180. (343 aa)    
Predicted Functional Partners:
NSP_50100
Glycosyl transferase, group 1; Nsp50100; ORF_ID:nsp50100.
 
     0.775
NSP_50170
Hypothetical protein; Nsp50170; ORF_ID:nsp50170.
       0.773
NSP_50080
Glycosyl transferase, group 1; Nsp50080; ORF_ID:nsp50080.
 
     0.772
NSP_50090
Glycosyl transferase, group 1; Nsp50090; ORF_ID:nsp50090.
 
     0.756
NSP_49990
Nsp49990; ORF_ID:nsp49990.
  
     0.748
NSP_50590
Hypothetical protein; Nsp50590; ORF_ID:nsp50590.
  
     0.718
NSP_30540
Glycosyl transferase; Nsp30540; ORF_ID:nsp30540.
  
     0.705
NSP_23150
Hypothetical protein; Nsp23150; ORF_ID:nsp23150.
  
     0.663
NSP_53280
Glycosyltransferase; Nsp53280; ORF_ID:nsp53280.
  
     0.661
NSP_32420
Glycosyltransferase; Nsp32420; ORF_ID:nsp32420.
  
     0.625
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.