STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_50190Hypothetical protein; Nsp50190; ORF_ID:nsp50190. (213 aa)    
Predicted Functional Partners:
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
    
 0.836
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
    
 0.791
NSP_42130
Hypothetical protein; Nsp42130; ORF_ID:nsp42130; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.751
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
    
 0.720
NSP_26950
Long-chain-fatty-acid--CoA ligase; Nsp26950; ORF_ID:nsp26950.
     
 0.665
NSP_26940
Malonyl CoA-acyl carrier protein transacylase; Nsp26940; ORF_ID:nsp26940.
    
 0.662
NSP_42160
Malonyl CoA-acyl carrier protein transacylase; Nsp42160; ORF_ID:nsp42160.
    
 0.662
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.651
NSP_50200
Phospholipid-lipopolysaccharide ABC transporter; Nsp50200; ORF_ID:nsp50200.
       0.613
NSP_11580
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.408
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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