STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_50200Phospholipid-lipopolysaccharide ABC transporter; Nsp50200; ORF_ID:nsp50200. (576 aa)    
Predicted Functional Partners:
NSP_51260
Amino acid ABC transporter, ATP-binding protein; Nsp51260; ORF_ID:nsp51260.
 
     
0.897
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
   
 0.893
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
 
 0.889
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
  
 0.813
pstB
Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.754
NSP_48810
ABC transporter ATP-binding protein YvcR; Nsp48810; ORF_ID:nsp48810.
 
     
0.751
NSP_6440
Toxin secretion ABC transporter ATP-binding protein; Nsp6440; ORF_ID:nsp6440.
  
 
 
0.727
NSP_42160
Malonyl CoA-acyl carrier protein transacylase; Nsp42160; ORF_ID:nsp42160.
   
 0.724
NSP_7870
Bile acid beta-glucosidase; Nsp7870; ORF_ID:nsp7870.
    
  0.708
pstB-3
Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.695
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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