STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_50280Microcompartments protein precursor; Nsp50280; ORF_ID:nsp50280. (102 aa)    
Predicted Functional Partners:
NSP_40330
Carboxysome protein CcmL; Nsp40330; ORF_ID:nsp40330.
 
 
 
 0.974
NSP_25020
Hypothetical protein; Nsp25020; ORF_ID:nsp25020.
 
 
 
 0.803
NSP_50270
Hypothetical protein; Nsp50270; ORF_ID:nsp50270.
       0.518
NSP_50290
Carbon dioxide concentrating mechanism protein CcmK-like protein; Nsp50290; ORF_ID:nsp50290.
 
    
0.503
NSP_40340
Carboxysome protein CcmM; Nsp40340; ORF_ID:nsp40340.
   
 
 0.430
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.