STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_50320Transcriptional regulator, Crp/Fnr family; Nsp50320; ORF_ID:nsp50320. (46 aa)    
Predicted Functional Partners:
NSP_25060
Adenylate cyclase; Nsp25060; ORF_ID:nsp25060.
   
 0.883
NSP_10510
Ferredoxin-dependent glutamate synthase; Nsp10510; ORF_ID:nsp10510.
    
 0.877
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 0.868
NSP_52640
Signal transduction histidine kinase; Nsp52640; ORF_ID:nsp52640.
   
 0.858
NSP_50310
Transcriptional regulator, Crp/Fnr family; Nsp50310; ORF_ID:nsp50310.
       0.773
NSP_25080
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase; Nsp25080; ORF_ID:nsp25080; Belongs to the aldehyde dehydrogenase family.
    
 0.737
NSP_34330
Hypothetical protein; Nsp34330; ORF_ID:nsp34330.
    
 
 0.735
NSP_34990
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.735
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
 0.725
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.724
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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