STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_50560Bacilysin biosynthesis protein bacB; Nsp50560; ORF_ID:nsp50560. (211 aa)    
Predicted Functional Partners:
NSP_50550
Bacilysin biosynthesis protein bacA; Nsp50550; ORF_ID:nsp50550.
  
 
 0.884
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
  
 
 0.840
NSP_50570
3-oxoacyl-[acyl-carrier protein] reductase; Nsp50570; ORF_ID:nsp50570.
    
 0.831
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
  
 
 0.819
NSP_23940
Phosphinothricin N-acetyltransferase; Nsp23940; ORF_ID:nsp23940.
    
 0.806
NSP_32920
Ribosomal-protein-S5p-alanine acetyltransferase; Nsp32920; ORF_ID:nsp32920.
    
 0.787
NSP_20680
Xaa-Pro aminopeptidase; Nsp20680; ORF_ID:nsp20680; Belongs to the peptidase M24B family.
    
 0.767
NSP_8170
Xaa-Pro aminopeptidase; Nsp8170; ORF_ID:nsp8170; Belongs to the peptidase M24B family.
    
 0.767
NSP_13510
ThiJ/PfpI family protein; Nsp13510; ORF_ID:nsp13510.
    
  0.755
gmd
GDP-mannose 4,6 dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.755
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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