STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_51140ATPase component NikO of energizing module of nickel ECF transporter; Nsp51140; ORF_ID:nsp51140. (248 aa)    
Predicted Functional Partners:
NSP_51130
Transmembrane component NikQ of energizing module of nickel ECF transporter; Nsp51130; ORF_ID:nsp51130.
 
 0.988
NSP_51120
Nsp51120; ORF_ID:nsp51120.
 
 0.978
NSP_51100
Transmembrane component CbiQ of energizing module of cobalt ECF transporter; Nsp51100; ORF_ID:nsp51100.
 
 0.957
cbiM
Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.918
NSP_52320
Substrate-specific component BioY of biotin ECF transporter; Nsp52320; ORF_ID:nsp52320.
   
 0.916
NSP_34320
Transmembrane component of energizing module of ECF transporters in Cyanobacteria; Nsp34320; ORF_ID:nsp34320.
  
 0.895
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.739
NSP_18030
YbbL ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
    
0.716
NSP_46600
Methionine ABC transporter ATP-binding protein; Nsp46600; ORF_ID:nsp46600.
 
  
 
0.688
NSP_11960
ABC-type Fe3+-siderophore transport system, ATPase component; Nsp11960; ORF_ID:nsp11960.
 
    
0.664
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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