Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSP_51160Hypothetical protein; Nsp51160; ORF_ID:nsp51160. (250 aa)    
Predicted Functional Partners:
NSP_39040
Hypothetical protein; Nsp39040; ORF_ID:nsp39040.
  
     0.767
NSP_28230
Hypothetical protein; Nsp28230; ORF_ID:nsp28230.
  
     0.755
NSP_15520
Hypothetical protein; Nsp15520; ORF_ID:nsp15520.
  
     0.753
NSP_1840
Hypothetical protein; Nsp1840; ORF_ID:nsp1840.
  
     0.736
NSP_34690
Hypothetical protein; Nsp34690; ORF_ID:nsp34690.
  
     0.691
NSP_44230
Hypothetical protein; Nsp44230; ORF_ID:nsp44230.
  
     0.682
NSP_23900
Flagellar biosynthesis/type III secretory pathway protein; Nsp23900; ORF_ID:nsp23900.
  
     0.681
NSP_890
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Nsp890; ORF_ID:nsp890.
  
     0.663
NSP_41460
Flagellar biosynthesis/type III secretory pathway protein; Nsp41460; ORF_ID:nsp41460.
  
     0.659
NSP_15020
Hypothetical protein; Nsp15020; ORF_ID:nsp15020.
  
     0.654
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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