STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_51260Amino acid ABC transporter, ATP-binding protein; Nsp51260; ORF_ID:nsp51260. (253 aa)    
Predicted Functional Partners:
NSP_51250
Amino acid ABC transporter, permease protein; Nsp51250; ORF_ID:nsp51250.
 0.999
NSP_51230
Periplasmic amino acid-binding protein of amino acid ABC transporter; Nsp51230; ORF_ID:nsp51230; Belongs to the bacterial solute-binding protein 3 family.
 
 0.997
NSP_51240
General L-amino acid transport system permease protein aapQ; Nsp51240; ORF_ID:nsp51240.
 
 0.970
NSP_45780
Glutamine-binding protein of glutamine ABC transporter; Nsp45780; ORF_ID:nsp45780; Belongs to the bacterial solute-binding protein 3 family.
 
 0.930
NSP_48830
Cell division protein FtsX; Nsp48830; ORF_ID:nsp48830.
 
      0.900
NSP_51480
Phospholipid-lipopolysaccharide ABC transporter; Nsp51480; ORF_ID:nsp51480.
 
     
0.899
NSP_50200
Phospholipid-lipopolysaccharide ABC transporter; Nsp50200; ORF_ID:nsp50200.
 
     
0.897
NSP_18670
Oligopeptide transport system permease protein OppC; Nsp18670; ORF_ID:nsp18670.
 
    
 0.871
NSP_10510
Ferredoxin-dependent glutamate synthase; Nsp10510; ORF_ID:nsp10510.
  
  
 0.803
NSP_46190
Oligopeptide transport system permease protein OppC; Nsp46190; ORF_ID:nsp46190.
 
    
 0.793
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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