STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_51560Hypothetical protein; Nsp51560; ORF_ID:nsp51560. (523 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.990
NSP_25790
ATPase involved in DNA repair; Nsp25790; ORF_ID:nsp25790.
  
  0.986
NSP_4610
ATPase involved in DNA repair; Nsp4610; ORF_ID:nsp4610.
  
  0.985
NSP_10410
Hypothetical protein; Nsp10410; ORF_ID:nsp10410.
  
 0.954
NSP_2220
DNA sulfur modification protein DndD; Nsp2220; ORF_ID:nsp2220.
   
  0.944
NSP_2290
ATPase involved in DNA repair; Nsp2290; ORF_ID:nsp2290.
   
  0.944
NSP_30960
Exonuclease SbcC; Nsp30960; ORF_ID:nsp30960.
   
  0.944
NSP_4250
Myosin heavy chain; Nsp4250; ORF_ID:nsp4250.
   
  0.944
NSP_3660
ATP-dependent DNA helicase RecQ; Nsp3660; ORF_ID:nsp3660.
   
 0.919
NSP_42890
ATP-dependent DNA helicase RecQ; Nsp42890; ORF_ID:nsp42890.
   
 0.919
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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