STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_51650ABC-type transport system involved in resistance to organic solvents, permease component; Nsp51650; ORF_ID:nsp51650; Belongs to the MlaE permease family. (265 aa)    
Predicted Functional Partners:
NSP_11460
Iron(III)-transport ATP-binding protein sfuC; Nsp11460; ORF_ID:nsp11460.
 0.998
NSP_11440
Hypothetical protein; Nsp11440; ORF_ID:nsp11440.
 
 0.979
NSP_11130
Interaptin; Nsp11130; ORF_ID:nsp11130.
  
 0.938
NSP_50250
Hypothetical protein; Nsp50250; ORF_ID:nsp50250.
  
 0.917
NSP_32260
Undecaprenyl-phosphate galactosephosphotransferase; Nsp32260; ORF_ID:nsp32260; Belongs to the anti-sigma-factor antagonist family.
   
  0.828
NSP_12830
Anti-sigma F factor antagonist (spoIIAA-2); Nsp12830; ORF_ID:nsp12830.
   
  0.817
NSP_35990
Anti-sigma F factor antagonist (spoIIAA-2); Nsp35990; ORF_ID:nsp35990; Belongs to the anti-sigma-factor antagonist family.
   
  0.817
NSP_39220
Putative anti-sigma factor antagonist; Nsp39220; ORF_ID:nsp39220; Belongs to the anti-sigma-factor antagonist family.
   
  0.817
NSP_6540
Anti-sigma F factor antagonist (spoIIAA-2); Nsp6540; ORF_ID:nsp6540; Belongs to the anti-sigma-factor antagonist family.
   
  0.817
NSP_44020
Outer membrane protein/protective antigen OMA87; Nsp44020; ORF_ID:nsp44020.
 
     0.739
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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